Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124602g00001 GCTATTATGGCTGCTATCCTGAGTCACGGACCTGAGAAGCTTCAGGAACATTTGTTGTTGGATGTCAATTCCCTTTCACTTGGTTTGGAAACTGCTGGTGGGGTCATGACTGCCCTCATTCCAAGGAACACTTCAATCCCAACCGTGAAGGAGGAAATTTTCTCAACCTACGTTGACAACCAATCTGGTGTCCTTATCCAAGTGTACGAGGGTGAGAGAGGCATGACCAAGGACAATAGCTTGTTGGGTACATTNNCTTCTCCAAGGGGTGTTCCTCAGATCAATGTTTGTTTTGACATTGATGCTAATGGTATCGTAAATGTCTCTGCCGAGGACAAAACTACTGGGCAAAAGAACAAGATCACTATCACCAATGACAAAGGCAGACTTTCAAAGGAGGAGATTGAGAAGATGGTGCAGGAGGCGGAGAAGTACAGGGTTGAGGATGAGGAGCACAAGAAGAAGACCGTTGCTAAGAATTCCATGGTGAAGATGGTGCAGGATGAGGAAAAGGACAATTCTACCAAAGATACTCCAGATCAACACTTGCATGCACTAGAAGATACTTGTCATACTGTACCAACCCCAAGTTTACACTCCTTCCCTTCCGGAA 613 0.4535 AIMAAILSHGPEKLQEHLLLDVNSLSLGLETAGGVMTALIPRNTSIPTVKEEIFSTYVDNQSGVLIQVYEGERGMTKDNSLLGTXXSPRGVPQINVCFDIDANGIVNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYRVEDEEHKKKTVAKNSMVKMVQDEEKDNSTKDTPDQHLHALEDTCHTVPTPSLHSFPSG 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124602g00001 204 PRINTS 70kDa heat shock protein signature 16 35 - -
Trme124602g00001 204 PRINTS 70kDa heat shock protein signature 91 107 - -
Trme124602g00001 204 MobiDBLite consensus disorder prediction 158 204 - -
Trme124602g00001 204 Coils Coil 135 155 - -
Trme124602g00001 204 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 12 161 IPR029047 -
Trme124602g00001 204 PANTHER HEAT SHOCK PROTEIN 70KDA 1 173 IPR013126 GO:0005524|GO:0140662
Trme124602g00001 204 Pfam Hsp70 protein 1 176 IPR013126 GO:0005524|GO:0140662
Trme124602g00001 204 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 8 180 IPR029047 -
Trme124602g00001 204 FunFam Heat shock 70 kDa 11 160 - -
Trme124602g00001 204 MobiDBLite consensus disorder prediction 158 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme124602g00001 Trme-Chr124602 1 613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124602g00001 1 162 Calmodulin-binding Proteins AT3G12580 78.107 4.15e-83 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124602g00001 K03283 - dct:110099937 248.054