Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124450g00001 AAAGAAGCTGAGGAGTACAAAGAGGAAGACAAGAGGTATAGAAAGAAGGTGGAAGCAAGAATTGCAGTGGAGACGTATGCATACAACTTGAGGAATGCAATAAATGATAAGGAGATTAGCTCGAAACTTTCCATTGAAGATAAGAAAAAGATCAATGATGCAATTGATTTGGTCTTAAGCTGGCTTGATGTCAATATGGTTGCAGAACCATATGATTTTGAGTGTTATGCAAAAGCTCTTTCAGATGTNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNGTGCAGCAAGATAGTGTCTTCAGCTGCAACAGGTAACATCATCGGATTAGCTTCTACTATAATTAGTGCTACTTTTTCAAATTGCTAA 375 0.3333 KEAEEYKEEDKRYRKKVEARIAVETYAYNLRNAINDKEISSKLSIEDKKKINDAIDLVLSWLDVNMVAEPYDFECYAKALSDVXXXXXXXXXXXXXCSKIVSSAATGNIIGLASTIISATFSNC 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124450g00001 124 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 18 83 IPR029048 -
Trme124450g00001 124 Gene3D - 1 88 IPR029048 -
Trme124450g00001 124 Pfam Hsp70 protein 1 57 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme124450g00001 Trme-Chr124450 3 454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124450g00001 1 80 Calmodulin-binding Proteins AT3G12580 55.000 4.24e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124450g00001 K03283 - gmx:100783822 95.1301