Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1244024g00001 GGCAAACTGCAAGATGGGCGTCGTGTTGCAGTGAAGATGCTTAATGAGTACATCCACAATAGAAATGCGTTGTTTATGACTGAAGTTCAGAATCTGGCTAAACTTTCCCACCCAAATCTTGTGCACTTCGCTCAAAAGCAACACACCTATGCTTGTCTATGA 162 0.4321 GKLQDGRRVAVKMLNEYIHNRNALFMTEVQNLAKLSHPNLVHFAQKQHTYACL 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1244024g00001 53 Pfam Protein tyrosine and serine/threonine kinase 5 44 IPR001245 GO:0004672|GO:0006468
Trme1244024g00001 53 SUPERFAMILY Protein kinase-like (PK-like) 3 43 IPR011009 -
Trme1244024g00001 53 Gene3D Phosphorylase Kinase; domain 1 1 45 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1244024g00001 1 41 Receptor kinase-like Gene Family AT1G25390 51.220 1.42e-07 43.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trme1244024g00001 PK_Tyr_Ser-Thr 9.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1244024g00001 - - han:110911472 51.9878