Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124383g00001 ATGTCGAAGGTACCCTCGGTTTATATATTTGTGGCAATTATTCCAGCTTTGATGATAGCAGGTTTATACTTTTTCGATCATAGTGTGGCTTCTAAGATGGCACAACAGAAAGAATTCAACCTTCAAAATCCATCTGCGTACCATTATGATATTTTCCTACTTGGAATAATGACTCTGATTTGTGGTCTCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTGGCGGTTCTTAGGAAGCAGCTAATCCGAAAGAGGGTTGTGCAAAGCGCCACGGAATGCATTCAACAACAGG 319 0.4263 MSKVPSVYIFVAIIPALMIAGLYFFDHSVASKMAQQKEFNLQNPSAYHYDIFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRKQLIRKRVVQSATECIQQQ 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124383g00001 106 PANTHER ANION EXCHANGE PROTEIN 1 95 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trme124383g00001 106 Pfam HCO3- transporter family 2 89 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme124383g00001 Trme-Chr124383 20 533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124383g00001 1 106 Antiporters AT5G25430 78.302 5.99e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124383g00001 K24194 - qsa:O6P43_015658 190.66