Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124374g00001 ATGCATGATTTGCTTCAAGAAATGGGTAGAAATATTGTTCTCCATGAATCTCTTAATGATGCCGGCAAGCGGAGTAGGTTGTGGTGTCTCAAGGACATTGATCAAGTATTGAGAAATAATAAGGGAACTGAATCCACTCAAGCTGTAGTTCTAAATCTGCCTGAAGCATTTGAAGCAAGTTGGAACCCTGAAGCTTTTGCAAAGATGGGTAATCTTAAATTGCTCATGATATTAAATAAATTGCAACTTCCACTTGGTCTCAAATGTCTTCCCAGTGGGTTAAAAGTTCTTGAATGGAGGGAATGTCCGCTCGAGTCATTGCCAGTTGGAGACCAATTGGACGAACTTGTTGACCTTAATATGTGTGATAGCAAAATAAAGTACCTTTGGAGAGGAACAAAG 402 0.3955 MHDLLQEMGRNIVLHESLNDAGKRSRLWCLKDIDQVLRNNKGTESTQAVVLNLPEAFEASWNPEAFAKMGNLKLLMILNKLQLPLGLKCLPSGLKVLEWRECPLESLPVGDQLDELVDLNMCDSKIKYLWRGTK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124374g00001 134 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 129 IPR044974 GO:0006952
Trme124374g00001 134 Pfam Leucine Rich Repeat 116 134 IPR011713 -
Trme124374g00001 134 SUPERFAMILY L domain-like 47 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme124374g00001 Trme-Chr124374 64 548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124374g00001 1 134 WRKY Transcription Factor Family AT4G12020 39.437 1.49e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124374g00001 - - tpra:123888765 259.996