Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12435g00001 CAACTTTTACAGGTACCAAACCCTAATTGGCCGGAGAAAAAGGCGATCGATGAGACGTCGTGGACGGATGTTGAGTACTGTAAATTGAGGGGGAAGTGGTATCCGGTGTCGAAGACCGAGGCTGAGAAGGCGGCGTGGGAATTTCGAGAGAAAAATGATGGTATTGATGTGGTGGCAATTCATCCGGGGACTTGTTTGGGGGAGTTGATACAGAAGGAGATGAATGCAAGTTCAGCGGTGTTGCAGAGGTTGATGATGGGGAGCAAGGATACTCAAGAGTGTTATTGGTTGGGGGCTGTTCATGTTAAAGATGTTGCTAGAGCTCATGTGTTGGTTTATGAAACTCCAACTGCTGCTGGTAGATATCTTTGTGTTAATGGGATATATCAGTTTTCTAGTTTTGCTAAAACTGTCTCTGAATTGTATCCTGATTTTCCTATTCACAGTTGTTCAATTGGGATGCTTTCCAACATGTGGGAAAAACCAAACGTTTCATGTAGCTGTAGGGATAACCTAGTGCGCCTAACGGGGGTTAGAGACCTAAGCTTAGTGCGCCTAGTGGGGGTTAGAGATCCTAGTTCCACTCTTCGTTGCTGTGTTAATGTGTTTAAAACATTGAGCAGTGATCGGANNTCCTTTAGCTATCACAATCCTGTG 657 0.4475 QLLQVPNPNWPEKKAIDETSWTDVEYCKLRGKWYPVSKTEAEKAAWEFREKNDGIDVVAIHPGTCLGELIQKEMNASSAVLQRLMMGSKDTQECYWLGAVHVKDVARAHVLVYETPTAAGRYLCVNGIYQFSSFAKTVSELYPDFPIHSCSIGMLSNMWEKPNVSCSCRDNLVRLTGVRDLSLVRLVGVRDPSSTLRCCVNVFKTLSSDRXSFSYHNPV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12435g00001 219 Gene3D - 3 175 - -
Trme12435g00001 219 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 155 IPR036291 -
Trme12435g00001 219 Pfam NAD dependent epimerase/dehydratase family 33 118 IPR001509 -
Trme12435g00001 219 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 15 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12435g00001 Trme-Chr12435 358 1606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12435g00001 5 148 Monolignol Biosynthesis Gene Families AT2G02400 63.889 1.47e-68 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12435g00001 - - gmx:100795399 230.72