Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124334g00001 GTTAAAGGCAAGGGATTCATTGCTAAAGACATACAATTCAAGAACACTGCAGGTGCATCTAAGCACCAGGCTGTCGCATTACGATCTGGCTCGGATGAATCTGTGTTCTATAG 113 0.4425 VKGKGFIAKDIQFKNTAGASKHQAVALRSGSDESVFY 37
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124334g00001 37 PANTHER PECTINESTERASE 1 37 - -
Trme124334g00001 37 Pfam Pectinesterase 1 37 IPR000070 GO:0030599|GO:0042545
Trme124334g00001 37 Gene3D - 1 37 IPR012334 -
Trme124334g00001 37 SUPERFAMILY Pectin lyase-like 1 37 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme124334g00001 Trme-Chr124334 82 194 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124334g00001 1 37 Carbohydrate Esterase AT4G02300 72.973 3.02e-13 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124334g00001 - K01051 lang:109360530 68.1662