Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme124320g00001 TGCCCGTTGGGTAGAAACCGTACAAGGATCGTGGAAGCGGGTGGAGTAACTGAGCTTGTTGAACTCGAGCTTGAAAAACCCGAGAAGAACATGACCGAGCTTGTATTCAACCTTTTGGCACATTTGTGCTCGTGTGCGGAAGGAAGAGAACAATTTTTGCGACACGCGGCAGGTTTAGCAATGATTTCGAAAAGGATTTTGAGGGTCTCAGCCGCAACCGATGATCTAGCTATTCAAGTAATTTCAGTGATTGCGAAGTATTCAACTTCGAAAGAGATTGTTTTAGAGATGTTGAGGGTTGGAACGGTTTCGAAGCTTTGCATGGTAATGCAAGCTGATTGTGCTTCTTATTTGAAAGAGAAAGCTAGAGACATACTTAGGTTACATTCAACTTCTTGGAATAATTCTCCTTGCATACAAGTGTATTTGTTAACTAGGCACCAAAGGTGA 450 0.4267 CPLGRNRTRIVEAGGVTELVELELEKPEKNMTELVFNLLAHLCSCAEGREQFLRHAAGLAMISKRILRVSAATDDLAIQVISVIAKYSTSKEIVLEMLRVGTVSKLCMVMQADCASYLKEKARDILRLHSTSWNNSPCIQVYLLTRHQR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme124320g00001 149 PANTHER WDSAM1 PROTEIN 1 140 IPR045185 GO:0061630
Trme124320g00001 149 SUPERFAMILY ARM repeat 6 124 IPR016024 -
Trme124320g00001 149 Gene3D - 3 140 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme124320g00001 Trme-Chr124320 1 450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme124320g00001 5 146 U-box Gene Family AT3G11840 47.552 1.17e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme124320g00001 - - vvo:131625920 249.21