Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1242913g00001 ATGAAGTCAACAACACCTCACATGTTTTGTAAAACTTTGACTGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTGCCTCGTCGAGCAGCTGAAGATTGCTTTCCTCCCATG 114 0.4474 MKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPM 38
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1242913g00001 38 Gene3D - 7 38 IPR015300 -
Trme1242913g00001 38 SUPERFAMILY DNA-binding pseudobarrel domain 3 38 IPR015300 -
Trme1242913g00001 38 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 4 38 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1242913g00001 Trme-Chr1242913 31 144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1242913g00001 5 38 B3 DNA Binding Superfamily AT5G60450 94.118 4.16e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1242913g00001 K14486 - qsa:O6P43_012697 84.3445