Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12416g00001 ATGGGATTTGGTAGGAAAATAATAGTATGCTTGTTGATGATCATCACAATAGGGTGCAATGAGATTGATGGTAGAGAACCTGTGTTGCATAGGGTTGGAGGTGGAAAGTATACTTGGAAACCAAAAATTAACTTCACACAATGGGCTAGTAATGAACACTTCTACAAGGATGATTGGCTATATTTTGGTTTTGATAAGCACATTTATAATGTTCTTGAGGTGAACAAAACAAATTATGAGAAATGTATTGACACTGGCTACATAAATAACATCACTAGAGGAGGAAGAGATGTTTTCCAACTTTCGGAAGAGAGGACATATTACTTTCTATGTGGTAGAGGCTTTTGCTTTCAAGGAATGAAGGTTGAAATAAATGTTGAACCACTTGAACTACCACTACTACCTCCTCCAACAATTCCGAATAAGGCCGGCTCATCAAGAAACACGAATTATAGTATATTCGTTATACTTTTAGTCATCGCTTTGGCGTGGATCTTCATGTAG 504 0.369 MGFGRKIIVCLLMIITIGCNEIDGREPVLHRVGGGKYTWKPKINFTQWASNEHFYKDDWLYFGFDKHIYNVLEVNKTNYEKCIDTGYINNITRGGRDVFQLSEERTYYFLCGRGFCFQGMKVEINVEPLELPLLPPPTIPNKAGSSRNTNYSIFVILLVIALAWIFM 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12416g00001 167 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Trme12416g00001 167 FunFam Lamin-like protein 26 129 - -
Trme12416g00001 167 PANTHER BLUE COPPER PROTEIN 30 138 IPR039391 GO:0009055
Trme12416g00001 167 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Trme12416g00001 167 SUPERFAMILY Cupredoxins 29 126 IPR008972 -
Trme12416g00001 167 Gene3D - 28 130 IPR008972 -
Trme12416g00001 167 Pfam Plastocyanin-like domain 39 120 IPR003245 GO:0009055
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12416g00001 26 146 Phytocyanin Superfamily AT2G27035 55.372 2.77e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12416g00001 - - gmx:100789719 239.195