Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12382g00001 ATGGCTGAACCTTCAATTGAATTGAAACCCGACATTGATAAACCTGACATTGTTGAAATCGACATTGTTCAACCTGCCGAACCTGTGATTGTTAACACCGCCAAGCATTTTTTTACTAATGAAAAATATAAAGTTCGAGATGACTTGATCAATTGGGTTCGCTCTGAGGCTGCAAAAGTTGGTTTTACTGTAGTTATAGAGAAATCAGATAATGGCTCTGGGCGAAGGAAACAATTTTTTATATTGGGTTGTGAAAGAGGTGGTACGTACAAAGTGGGAAAAAAGAGGTTAACAAAAGAAGACACGGGGTCGAGGAAATGTCAGTGTCCATTTAGACTGCGCGGTTACTTTTTGGCATCACAAGAATGGAGTCTTAGTGTTGTGTGTGGTGAACATAACCATAAGATGGATAAAAAGCTAGAAGGTCATATGATTGCTGGGCGGTTAAAACCGGAAGAGAAGAAGTTTGTCCATGAGATGACAAGGAATTTGGTGCCACCTCGAAATATTTTGAACACTTTGAAAGATAGAAGTACAGAAAGTAAGTCTGCAATTAAGCAAATCTACAATGAGCGCCAAAGATTGAAAAAATTCATTAGGGGTACAAGGTCTGAAATGCAACAACTGTTGAAATGCCTTGAAGACCACAAATATGTTTACAAGATTAGAACTGTCGGTGAGTCTACAACTGTTCAAGATATTTTCTGGGCACATCCTGATAGTGTCAGATTGTTTAACACTTTTCCTACTGTGTTGTTGATGGACTCGACGTACAAAACCAACCGGTACAAAATGCCGTTGTTTGAGATAGTTGGCGTAACTTCGACTGAGATGTCGTATAACATTGGATTTGCTTTTATTGCTAATGAAAAAGAAGAAAATTTCACTTGGGTTCTTGAGATGTGTCTGACACTTTTGAAGTGTAAAGACATAGTGCCGAAGGTGGTTGTCACTGACAGGGATACCGCACTGATGAGTGCTGTTGTCAAAGTCTTTCCAAATTCAACTGTTTTAGTGTGTCAGTATCATATTTCTAAAAATGTGAGAGCTAAGTGCAAGAAGCTTTGTAGTTCAAAAGAAGTCAAACCGGAACAGTTATGGAATATTGTCATGGGTGCTTGGGAAGAAGTGATGTACTCTCCTTCTGAAGAATCATATGTAGATGCTGTTGTACAGTTCAGGAAG 1185 0.389 MAEPSIELKPDIDKPDIVEIDIVQPAEPVIVNTAKHFFTNEKYKVRDDLINWVRSEAAKVGFTVVIEKSDNGSGRRKQFFILGCERGGTYKVGKKRLTKEDTGSRKCQCPFRLRGYFLASQEWSLSVVCGEHNHKMDKKLEGHMIAGRLKPEEKKFVHEMTRNLVPPRNILNTLKDRSTESKSAIKQIYNERQRLKKFIRGTRSEMQQLLKCLEDHKYVYKIRTVGESTTVQDIFWAHPDSVRLFNTFPTVLLMDSTYKTNRYKMPLFEIVGVTSTEMSYNIGFAFIANEKEENFTWVLEMCLTLLKCKDIVPKVVVTDRDTALMSAVVKVFPNSTVLVCQYHISKNVRAKCKKLCSSKEVKPEQLWNIVMGAWEEVMYSPSEESYVDAVVQFRK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12382g00001 395 Pfam MULE transposase domain 251 347 IPR018289 -
Trme12382g00001 395 Pfam Transcription factor AFT 94 136 IPR014842 GO:0000981|GO:0036086
Trme12382g00001 395 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 358 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12382g00001 Trme-Chr12382 86 1270 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme12382g00001 MULE 8.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12382g00001 - - tpra:123891890 530.406