Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme123748g00001 GATGCAACTGATTATCTTCTTAATAATATGTTTTATGCAGTACATGATGAGCTTAAAAGGTTTCTATGTAATAATGTGAAAAGTGAAGAGGGTTTTAGTCACATAGATGTGTTGGAAGCTCTTTCTGAGGCAATGAGGAAAACTGAGGATGCATTTTTGAAGATAATTAATGAGATGATTAATCATAATCCTGTTTTGGCTATGATGGGWTCTTGTGTTTTGGTTATGTTRATGAAAGGTGAAGATGTTTATTTGATGAATGTTGGTGATAGTCGCGCTGTTTTAGCTACTCGGATTGGGAAACATCCTCAACTCACCATGGATCATAGCACTCATGTGAAAGAGGTAGATTTTTGA 357 0.3501 DATDYLLNNMFYAVHDELKRFLCNNVKSEEGFSHIDVLEALSEAMRKTEDAFLKIINEMINHNPVLAMMGSCVLVMLMKGEDVYLMNVGDSRAVLATRIGKHPQLTMDHSTHVKEVDF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme123748g00001 118 Gene3D - 1 116 IPR036457 -
Trme123748g00001 118 SUPERFAMILY PP2C-like 17 114 IPR036457 -
Trme123748g00001 118 Pfam Protein phosphatase 2C 25 111 IPR001932 -
Trme123748g00001 118 ProSiteProfiles PPM-type phosphatase domain profile. 1 118 IPR001932 -
Trme123748g00001 118 PANTHER PROTEIN PHOSPHATASE 2C 2 114 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme123748g00001 Trme-Chr123748 2 358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme123748g00001 1 98 PP2C-type Phosphatase Gene Family AT1G07630 38.816 3.11e-26 100