Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1236775g00001 CGTATGGCAAAGCTCGCAAGATCGGAGGGTGTTGAGGGAAGCAGTGCTCCAAAAGTTTATCACGCTGTTGACAATGATGAGCGTCCTGACACTGCTTTCACCACTGAGAGAGCAAAGAAAACAGGAAAGGCTAATGCCTGCAGTGGAAAAATCTTTGTGACGATTCCAAAAGATCATTTTGGACCGATTTCTGCTGAGAATGATCCAACA 210 0.4571 RMAKLARSEGVEGSSAPKVYHAVDNDERPDTAFTTERAKKTGKANACSGKIFVTIPKDHFGPISAENDPT 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1236775g00001 70 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 69 IPR045134 -
Trme1236775g00001 70 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1236775g00001 Trme-Chr1236775 1 210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1236775g00001 1 70 C2H2 Transcription Factor Family AT5G39550 62.857 3.10e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1236775g00001 K10638 - gmx:100781044 113.62