Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme123661g00001 TACTCAACCATATGCTTAGCTGTGTTATCAGTTGGTGCAATTCTTACCACTGCCAACCCTCTTAATACCAAGTCGGAAATCGCGAAACAAGTACATGATTCAGGTGCTAAACTAGCCATCTCGGCACCAGAAGAGTTACACAAATTGGTTCCAACTGGAGTTCCTACAATTCTCACCTCCGGTTCATCCGATGGAAAGTTTTTATCAGTTGAAGAGTTAATAGAAGGCTGCTACGATTCACAAGAGTTACCGCACGTTCCTGTGGAACAATCAGACACTGCTGCTATACTTTACTCTTCAGGTACTACAGGAGTAAGCAAAGGTGTTGTTTTGACACATGCGAATCTCATAACCATAATGAAACTACTCTGCTGGTCTGCTGATGTATCTGCAGCTCAAGATGATGTTTTCCTAGCCTTCATTCCAATGTTTCATATCTATGGACTGATGTTCTTTGGATTAGGGCTGTTGTGTGTTGGTGTTACGACAGTTTTGATGCAGAAATATGATTTCCAATCTATGCTTGTCGCTATCGAGAAGTACAAAGTTAATAACATACCAGCAGTGCCACCGGTGATCCATTCGTTGGTGAAACACGCAAGCAAAAATCGGTC 614 0.4218 YSTICLAVLSVGAILTTANPLNTKSEIAKQVHDSGAKLAISAPEELHKLVPTGVPTILTSGSSDGKFLSVEELIEGCYDSQELPHVPVEQSDTAAILYSSGTTGVSKGVVLTHANLITIMKLLCWSADVSAAQDDVFLAFIPMFHIYGLMFFGLGLLCVGVTTVLMQKYDFQSMLVAIEKYKVNNIPAVPPVIHSLVKHASKNRS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme123661g00001 205 ProSitePatterns Putative AMP-binding domain signature. 96 107 IPR020845 -
Trme123661g00001 205 SUPERFAMILY Acetyl-CoA synthetase-like 4 201 - -
Trme123661g00001 205 Pfam AMP-binding enzyme 4 201 IPR000873 -
Trme123661g00001 205 Gene3D - 1 205 IPR042099 -
Trme123661g00001 205 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme123661g00001 Trme-Chr123661 2 615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme123661g00001 1 202 Monolignol Biosynthesis Gene Families AT1G20510 38.835 3.93e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme123661g00001 K10526 - gmx:100783104 322.783