Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme123406g00001 ATGATGGGCTTGGATGTGAACGTGGTTCCACCAGTGACAGCGGTTGTTATGGCGGATGATGACGCGGCACTTTCATCGTCACCTAATAGCGCAGCGTCTTCTTTTCAAATGGATCTNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGGTGGTGGTGGGAGTTTGAGTGGCTCAGGAGGGAACAAGAGAGAGTTTTCTGATGGTGAAGGTTATGATCAAAGAAACTGTTCAAGAATTAGTGATGAAGATGATAACTGTGGTGGTGGAAACACAAGGAAGAAGCTTAGGCTCTCCAAAGATCAATCTGCTTTTCTTGAAGAGAGTTTCAAAGAACACCACACTCTTAATCCT 354 0.4068 MMGLDVNVVPPVTAVVMADDDAALSSSPNSAASSFQMDLXXXXXXXXXXXGGGGSLSGSGGNKREFSDGEGYDQRNCSRISDEDDNCGGGNTRKKLRLSKDQSAFLEESFKEHHTLNP 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme123406g00001 118 MobiDBLite consensus disorder prediction 66 100 - -
Trme123406g00001 118 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 21 118 - -
Trme123406g00001 118 MobiDBLite consensus disorder prediction 43 100 - -
Trme123406g00001 118 Pfam HD-ZIP protein N terminus 2 35 IPR006712 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme123406g00001 Trme-Chr123406 114 537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme123406g00001 26 118 Homeobox Transcription Factor Family AT5G06710 48.387 8.73e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme123406g00001 K09338 - gmx:100805312 105.531