Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme123364g00001 ATGTGGAGGTTGAAGAAAGAGGTGGACATGTTGATAATGAATATCATTCATGATCGTGAAATACAAAACCAAAGCAGAAATATTAATGAGAAACAAAGTGATCTATTACAAAAGATACTAGAAGGTGTTGCAAGTGACAAAACTTTGAATGCTAGAGAACATAACATGAACCAATTGATTGTTGATCTCTGCAAAAATATCTACTTTGCCGGCTCTGAGTCAACCGCTCTTGCAGTTACTTGGACATTGTTGCTCCTTGCATTACATCCAGAATGGCAACAGCGTGTTCGATCTGAGATTTCTGATACTTTCGATAACAAGTTGCCTCATTCTTTTCACGACATGAGCAAACTTCAAAATTTGAAAGTG 369 0.3686 MWRLKKEVDMLIMNIIHDREIQNQSRNINEKQSDLLQKILEGVASDKTLNAREHNMNQLIVDLCKNIYFAGSESTALAVTWTLLLLALHPEWQQRVRSEISDTFDNKLPHSFHDMSKLQNLKV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme123364g00001 123 SUPERFAMILY Cytochrome P450 2 121 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme123364g00001 123 Pfam Cytochrome P450 5 119 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme123364g00001 123 PRINTS E-class P450 group I signature 59 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme123364g00001 123 PRINTS E-class P450 group I signature 79 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme123364g00001 123 Gene3D Cytochrome P450 1 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme123364g00001 123 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme123364g00001 Trme-Chr123364 159 527 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme123364g00001 4 122 Cytochrome P450 AT5G24910 38.017 3.52e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme123364g00001 - - cam:101511709 151.754