Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12312g00001 AGTAAAACTTGTGATAATGAACCTATATCGTCAAGTCATAACAATCCTACTACACCACAACCTGACCCTTCTGATACAAATGAACCTATACCGTCAAGTCATAACGATCCTATTGCACCACAACCTCCCCCTGCTGATACAATGCCAGAAAGCAAGAATGTTTTAGAAGATGAAAGTAAGGCTGGTGAAGAGCAAGCTGCTGAGCCTGCAGATAACGGGGTCCCGGATTCGCCGCAGAACATGTATTTCTTGGATCCTGATCATTATTATGATGGTAATGAGCCGGGAACGGAAGTGGACCAAGCCGCTTTTATGAAGGAGCTTGAAAACTTCTTTAGAGAGAGGGGCATGGAATTCAAACCTCCCAAATTTTACGGAGAAACACTTAATTGTCTTAAGTGA 402 0.4303 SKTCDNEPISSSHNNPTTPQPDPSDTNEPIPSSHNDPIAPQPPPADTMPESKNVLEDESKAGEEQAAEPADNGVPDSPQNMYFLDPDHYYDGNEPGTEVDQAAFMKELENFFRERGMEFKPPKFYGETLNCLK 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12312g00001 133 SUPERFAMILY ARID-like 89 132 IPR036431 GO:0003677
Trme12312g00001 133 MobiDBLite consensus disorder prediction 1 34 - -
Trme12312g00001 133 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 29 133 IPR045147 GO:0006357
Trme12312g00001 133 MobiDBLite consensus disorder prediction 51 65 - -
Trme12312g00001 133 MobiDBLite consensus disorder prediction 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12312g00001 Trme-Chr12312 1 402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12312g00001 58 133 ARID Transcription Factor Family AT1G20910 40.789 4.65e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12312g00001 - - psat:127119953 209.149