Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme123117g00001 ATGCGAGTATATTATGTTAAAATTGATGAACTAACATTAAGCATTTTAATTCAGGGATGTGATGGATCAATCCTTTTGAACTCAACAAACAAACAAGCTGAAAAAGATGCTCCTCCAAATCTTACAGTTAGAGGCTTTGATTTTATTGACAGAATAAAGAGTCTTGTTGAAGCTGAATGCCCTGGTGTAGTCTCTTGTGCTGATATAATAGCTTTATCTGCAAGAGATTCTATTGCAGCCACAGGTGGTCCCTATTGGAAAGTTCCAACAGGCAGAAGGGATGGAGTCATATCTAATTTGGTGGAAGCAAGAAACAACATTCCTGCTCCATTTCACAACATCACCA 346 0.3786 MRVYYVKIDELTLSILIQGCDGSILLNSTNKQAEKDAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIIALSARDSIAATGGPYWKVPTGRRDGVISNLVEARNNIPAPFHNIT 115
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme123117g00001 115 SUPERFAMILY Heme-dependent peroxidases 17 114 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme123117g00001 115 PANTHER PEROXIDASE 25-RELATED 16 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme123117g00001 115 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme123117g00001 115 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme123117g00001 115 FunFam Peroxidase 18 113 - -
Trme123117g00001 115 ProSiteProfiles Plant heme peroxidase family profile. 16 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme123117g00001 115 PRINTS Plant peroxidase signature 6 26 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme123117g00001 115 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme123117g00001 115 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme123117g00001 115 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme123117g00001 115 Gene3D - 16 107 - -
Trme123117g00001 115 Pfam Peroxidase 17 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme123117g00001 Trme-Chr123117 1 596 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme123117g00001 16 115 Peroxidase AT4G11290 69.608 3.65e-48 154