Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1230519g00001 ATGCCTAATGCGAAAGAACGTTCCGAGGCTAGTAAAGAATTATTGGAAGCTTTGCAGTTTCTTGAGAATGAGTTGAAAGACAAGTTCTTTGGAGGGCAAGAGATTGGTTTTGTGGATATTGCTGCTCTCTTCATCCCTTTATTCCAAGAAGTAGCAGAGTTTCAGTT 167 0.4012 MPNAKERSEASKELLEALQFLENELKDKFFGGQEIGFVDIAALFIPLFQEVAEFQ 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1230519g00001 55 Gene3D - 1 55 - -
Trme1230519g00001 55 SUPERFAMILY GST C-terminal domain-like 2 44 IPR036282 -
Trme1230519g00001 55 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 55 IPR010987 -
Trme1230519g00001 55 Coils Coil 4 24 - -
Trme1230519g00001 55 Pfam Glutathione S-transferase, C-terminal domain 4 45 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1230519g00001 Trme-Chr1230519 1 167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1230519g00001 6 52 Glutathione S-transferase Gene Family AT3G09270 55.769 1.80e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1230519g00001 K00799 - gmx:548029 74.7146