Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme123006g00001 AAAACTGCAATAAAAAAGATGACGATGTTAGCGACAAGAGAATTTCTTGCTGAAATGAAAGTCTTAACAAGTGTTCATCACCGCAATCTGGTACGCTTGATTGGATATTGTATTGAGGGATCTCTATTCCTTGTCGAAAGAACCGCTGACATGGTCTACCAGGTTGCGAATTGCTCTAGATGTAGCGAGAGGCCTCGAGTATATTCATGA 210 0.4095 KTAIKKMTMLATREFLAEMKVLTSVHHRNLVRLIGYCIEGSLFLVERTADMVYQVANCSRCSERPRVYS 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme123006g00001 69 Gene3D Transferase(Phosphotransferase) domain 1 1 62 - -
Trme123006g00001 69 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 45 IPR044812 GO:0019199|GO:0045087
Trme123006g00001 69 SUPERFAMILY Protein kinase-like (PK-like) 3 45 IPR011009 -
Trme123006g00001 69 Pfam Protein tyrosine and serine/threonine kinase 3 45 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme123006g00001 Trme-Chr123006 165 579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme123006g00001 1 45 Receptor kinase-like Gene Family AT3G21630 77.778 5.45e-19 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trme123006g00001 PK_Tyr_Ser-Thr 1.7e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme123006g00001 - K13429 rvl:131323026 79.3369