Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12291g00001 GTATTAGCTGATAGTTTGGGCATCCCTTGTCGGTTGGTGAAAGGAATGCAATATACAGGTTCAGATGATGTGGCAATGAACTTTGTCAAGATTGATGAGGGAAGGGAATACATTGTTGACCTCATGGCAGCTCCTGGAACTCTTATTCCATCTGATGCAACTGGTTCACATATTGAGTATGATGATTCTTCTTTTATAGCCAGTCCTTCATCAAGAGACCTTGATTCATCTCACATTGCATCGTTCAGCACCGGGGTTGGAAGTTCATCTGAAGAAACTTCAGAGTTTGCGACTTTTGATAAAGGAAATAGATACAAACATTTTGCCTATGCAGAGAAGGAATCGGATGTAAGTAGCCCCCCCACTGGCAAGGAAGAAACAAAGAAACCACTAAACGAATTCAAAAATATCCCTAACGTAGAAAAGATCAAGGCGAGGGAATCTGTTAGCAGACCTAATAATTATCCATATACGCACGGAAGATCTCCTTCTTGGACAGAAGGGATCAGTTCCCCGGCAGCACATCGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCCAAGGAAAACCCTAACTTGGCTCAAAAACTTCATGATGTTTTACTCGAAAGTGGCGTTGTTGCTCCTCCAAACTTGTTTTCTGAAATTTATCATGAGCAGTTAGGTTCCCAAAATGAGGCCAATTCTCCAACTGAAGAAAAAGATGAATATAAACAGGGAAGTGCACAGAAAGAAGATACGGTTGGCGATAATCTAGGTCCTCGATTTTTGCCTCCGTTGCCTCCCCACCGAATTCATCCCAAAGCAAGTCCTAGCAATCAGCTGGAGCATTCTAAGCCTGTAGAAGGTTTGGGAATTGGCCTTTCTCTTGATACAAGAGAAGCTGCTGGACAGCACATACATTCCGAGGCAGAGGCAACGCAAGTAAAGTATGGGAAAAATGTCCCGGTTGCTGCTGCTGCAGCGGCCGCGGCTGCTGTTGTTGCATCTTCAATGGTAGTTGCTGTGGCAAAGTCAAACACTGATTCAAATTTTGAGATTCCTGTAGCGGCAGCTGCTACTGCTACTGCTGCAGCTGTTGTAGCAACCACTGCTGCTGTCAATAAACAGTATGAGCAGGGGAGTCGAAGTGACGGAGATACTGATGGTTCTGGTAATGAGCCAAAAGGTAGCGGTGATGGAAAG 1194 0.4422 VLADSLGIPCRLVKGMQYTGSDDVAMNFVKIDEGREYIVDLMAAPGTLIPSDATGSHIEYDDSSFIASPSSRDLDSSHIASFSTGVGSSSEETSEFATFDKGNRYKHFAYAEKESDVSSPPTGKEETKKPLNEFKNIPNVEKIKARESVSRPNNYPYTHGRSPSWTEGISSPAAHRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHEQLGSQNEANSPTEEKDEYKQGSAQKEDTVGDNLGPRFLPPLPPHRIHPKASPSNQLEHSKPVEGLGIGLSLDTREAAGQHIHSEAEATQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSNTDSNFEIPVAAAATATAAAVVATTAAVNKQYEQGSRSDGDTDGSGNEPKGSGDGK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12291g00001 398 MobiDBLite consensus disorder prediction 144 169 - -
Trme12291g00001 398 MobiDBLite consensus disorder prediction 232 246 - -
Trme12291g00001 398 MobiDBLite consensus disorder prediction 151 169 - -
Trme12291g00001 398 MobiDBLite consensus disorder prediction 374 398 - -
Trme12291g00001 398 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 1 61 - -
Trme12291g00001 398 Pfam Ethylene-responsive protein kinase Le-CTR1 1 49 - -
Trme12291g00001 398 MobiDBLite consensus disorder prediction 226 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12291g00001 Trme-Chr12291 287 1613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12291g00001 1 396 MAP Kinase Kinase Kinase AT1G73660 51.122 7.40e-88 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12291g00001 - - gmx:100778331 553.903