Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122877g00001 ACCGGAAGGTTCTCTAATGGGAGAATACCAACTGATTTCATATCAGAAGCTTTTGGTATAAAAGAATATGTGCCTGCATACTTGGATCCTAAGTATAATATTTCAGATTTTGCTACTGGTGTCAGTTTTGCTTCTGCTGCTACTGGTTATGATAATGCAACTTCAGATGTACTTTCTGTGATACCGTTATGGAAGCAATTAGAGTACTACAAGGAATACCAAAAGAATCTGAGTTCATATCTTGGTGAAACCAAAGCAAAAGAGACAATATCCGAATCAGTACACCTTATGAGTATAGGAACAAATGATTTCCTAGAAAATTACTATACCATGCCTGGCAGGAGATCACAGTACACACCTGAACAGTACCAAACTTTTCTTGCTGGAATAGCTGAGAATTTCATAAGGAATCTATATGGTCTTGGTGCTAGGAAGATATCCCTTGGAGGGTTACCTCCCATGGGATGTTTGCCATTGGAGAGAACCACAAATTTTATGG 499 0.3848 TGRFSNGRIPTDFISEAFGIKEYVPAYLDPKYNISDFATGVSFASAATGYDNATSDVLSVIPLWKQLEYYKEYQKNLSSYLGETKAKETISESVHLMSIGTNDFLENYYTMPGRRSQYTPEQYQTFLAGIAENFIRNLYGLGARKISLGGLPPMGCLPLERTTNFM 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122877g00001 166 PANTHER GDSL ESTERASE/LIPASE EXL3 1 164 - -
Trme122877g00001 166 Pfam GDSL-like Lipase/Acylhydrolase 1 158 IPR001087 GO:0016788
Trme122877g00001 166 Gene3D SGNH hydrolase 1 165 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122877g00001 Trme-Chr122877 1 618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122877g00001 1 161 Pollen Coat Proteome AT1G75910 40.123 5.04e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122877g00001 - - gmx:100804416 303.138