Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme122824g00001 | ATGTTTGACTCGGGAATGGTGGACGAGTTAGCCGAGTTTTATGAACCGGATGCAGATAACCGAACCGGGTTAAGAAAAGCAATCGGTGTACCCGAGTTCGACCGGTTTTTTAAAGAGTATCCACCGGTTGGACCCATGGAAAAAGAAGGTATTAATTCGATGCGGGAACGTGCATACGAGGAAGCAGTGAAAGCGATTAAAGATAACACGTGTCAGCTAGCTAAGCGTCAGATAGGAAAGATCTTACGGTTAAAACGAGCTGGATGGGACCTACAAAGAATTGATGCAACGGAGGCGTTTAGGGCGGTGCTGACGTCAGAGTCTAACGGCGGAGGAGAAGGATTTTCCGATGTATGGAAAAAACAAGTGTTGGAACCAAGCGTGAAGATTGTGAAGAGATTCTTGATGGAGTAG | 414 | 0.4638 | MFDSGMVDELAEFYEPDADNRTGLRKAIGVPEFDRFFKEYPPVGPMEKEGINSMRERAYEEAVKAIKDNTCQLAKRQIGKILRLKRAGWDLQRIDATEAFRAVLTSESNGGGEGFSDVWKKQVLEPSVKIVKRFLME | 137 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme122824g00001 | 137 | PANTHER | TRNA DIMETHYLALLYLTRANSFERASE | 1 | 135 | IPR039657 | - | |
| Trme122824g00001 | 137 | Gene3D | Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 1 | 91 | - | - | |
| Trme122824g00001 | 137 | Pfam | IPP transferase | 1 | 78 | - | - | |
| Trme122824g00001 | 137 | Gene3D | - | 92 | 135 | IPR027417 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme122824g00001 | Trme-Chr122824 | 16 | 429 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme122824g00001 | 1 | 135 | C2H2 Transcription Factor Family | AT2G27760 | 30.769 | 2.31e-11 | 58.2 |