Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122824g00001 ATGTTTGACTCGGGAATGGTGGACGAGTTAGCCGAGTTTTATGAACCGGATGCAGATAACCGAACCGGGTTAAGAAAAGCAATCGGTGTACCCGAGTTCGACCGGTTTTTTAAAGAGTATCCACCGGTTGGACCCATGGAAAAAGAAGGTATTAATTCGATGCGGGAACGTGCATACGAGGAAGCAGTGAAAGCGATTAAAGATAACACGTGTCAGCTAGCTAAGCGTCAGATAGGAAAGATCTTACGGTTAAAACGAGCTGGATGGGACCTACAAAGAATTGATGCAACGGAGGCGTTTAGGGCGGTGCTGACGTCAGAGTCTAACGGCGGAGGAGAAGGATTTTCCGATGTATGGAAAAAACAAGTGTTGGAACCAAGCGTGAAGATTGTGAAGAGATTCTTGATGGAGTAG 414 0.4638 MFDSGMVDELAEFYEPDADNRTGLRKAIGVPEFDRFFKEYPPVGPMEKEGINSMRERAYEEAVKAIKDNTCQLAKRQIGKILRLKRAGWDLQRIDATEAFRAVLTSESNGGGEGFSDVWKKQVLEPSVKIVKRFLME 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122824g00001 137 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 135 IPR039657 -
Trme122824g00001 137 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 1 91 - -
Trme122824g00001 137 Pfam IPP transferase 1 78 - -
Trme122824g00001 137 Gene3D - 92 135 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122824g00001 Trme-Chr122824 16 429 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122824g00001 1 135 C2H2 Transcription Factor Family AT2G27760 30.769 2.31e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122824g00001 K10760 - gmx:100813761 194.512