Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122792g00001 ATTCGATATCGCCCTAATGCTCCATTAGTCCTCAAGGGAATCACTTGTACATTTAAAGAAGGGAGTAGGGTAGGAGTTGTTGGACGGACTGGAAGTGGAAAAAGTACACTTATTAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTCATTGATGGGATGAACATWTGCTCAATGGGGTTGAAGGATTTKAGAATGAGGCTRAGCATAATCCCTCAAGAACCAACTCTTTTCAAGGGAARTATTAGGACAAACYTGGATCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAGGTGAACTAA 315 0.4063 IRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGMNICSMGLKDXRMRLSIIPQEPTLFKGXIRTNLDPLGLYSDDEIWKVN 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122792g00001 104 Gene3D - 1 104 IPR027417 -
Trme122792g00001 104 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 103 - -
Trme122792g00001 104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 102 IPR027417 -
Trme122792g00001 104 Pfam ABC transporter 11 102 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122792g00001 Trme-Chr122792 144 458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122792g00001 4 89 Calmodulin-binding Proteins AT2G36910 37.209 2.74e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122792g00001 - - vvo:131595584 186.808