Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1227849g00001 GTGGTGGTTCCTAGGAATACTTCTATACCTTTCAAGGGGACTCGCTGGTGTGGTACTGCTAAGGATAACCAAGATAATGCCTTGATTAATGTTTATGAGGGTGAGAGGGCAAGAGCCACTGACAACAATCTGCTTGGTACTTTTATATTCTTTCTTGTCTTCTAG 165 0.4242 VVVPRNTSIPFKGTRWCGTAKDNQDNALINVYEGERARATDNNLLGTFIFFLVF 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1227849g00001 54 Pfam Hsp70 protein 3 48 IPR013126 GO:0005524|GO:0140662
Trme1227849g00001 54 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 52 IPR029047 -
Trme1227849g00001 54 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 50 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1227849g00001 Trme-Chr1227849 3 167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1227849g00001 1 48 Calmodulin-binding Proteins AT1G16030 60.417 1.43e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1227849g00001 K03283 - lja:Lj0g3v0151879.1 71.2478