Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122725g00001 ATGCAAATAGCCCTTGATGTAGCAAGAGGCCTTGAATACATTCATGAGCATTCAGTGCCTGTGTATATCCATCGCGATATAAAACCAGATAATATTTTATTAAATGAAAATTTCACTGCAAAGATTGCAGATTTCGGAGTAACCAAGCTTACGGATATTGCAAATTCAACAGATCAAACTCATCATACGGCAGGCACATTTGGTTACATGCCACCTGAAAATGCATACGGACAWATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAGCAGCTGTGATCAAGATCGATAAAACCGAGTTCAAGAGCCTTGAGATTACGACCAATGAATCTATTGATGAATATTACACGAGTCTTGTAGCTTTG 393 0.3715 MQIALDVARGLEYIHEHSVPVYIHRDIKPDNILLNENFTAKIADFGVTKLTDIANSTDQTHHTAGTFGYMPPENAYGXISRKIDVYAFGVVLYELISAKAAVIKIDKTEFKSLEITTNESIDEYYTSLVAL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122725g00001 131 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 114 IPR044812 GO:0019199|GO:0045087
Trme122725g00001 131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Trme122725g00001 131 SUPERFAMILY Protein kinase-like (PK-like) 2 111 IPR011009 -
Trme122725g00001 131 SMART serkin_6 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme122725g00001 131 Pfam Protein kinase domain 2 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme122725g00001 131 ProSiteProfiles Protein kinase domain profile. 1 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme122725g00001 131 Gene3D Transferase(Phosphotransferase) domain 1 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122725g00001 Trme-Chr122725 40 598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122725g00001 1 123 Receptor kinase-like Gene Family AT3G21630 61.600 1.40e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trme122725g00001 Pkinase 4.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122725g00001 - K13429 vvo:131616003 220.32