Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122609g00001 ATGCACGGTAGAGTAACCGACAAAATTGATGTTTATGCTTTTGGTGTTGTACTCCTTGAGCTTCTATCCAATAGGAAGCCCATTAACAATGAATGTCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCAACATCAATCTTGAAAAGTGGGAAGATTTCCCAGTTGCTTGACCCAAGCCTTGGCAGTGAATACAACGATTGCGAGATCAAGAGAATGGTGTTGGCTGCTACTTTATGTATTAGACGAGTTCCTAGACTGCGACCTCAAATCAGCCTTATACTGAAACTTCTTAATGGTGACGAAGAAGTAACACGATGGGCAGAACAAGAAGTTTGTGCACCAGAGACACATGATGGACTTGATGAAGAACCA 372 0.4328 MHGRVTDKIDVYAFGVVLLELLSNRKPINNECPKGQESLVMWATSILKSGKISQLLDPSLGSEYNDCEIKRMVLAATLCIRRVPRLRPQISLILKLLNGDEEVTRWAEQEVCAPETHDGLDEEP 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122609g00001 124 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Trme122609g00001 124 SUPERFAMILY Protein kinase-like (PK-like) 3 104 IPR011009 -
Trme122609g00001 124 PANTHER OS08G0249100 PROTEIN 1 105 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122609g00001 Trme-Chr122609 1 619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122609g00001 3 104 Trihelix Transcription Factor Family AT5G38560 40.566 4.61e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122609g00001 - - gmx:100817908 218.779