Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1225362g00001 GGTGAAGCTAAAACAACAGCTGCTGATGTGATTTGGGATCTGTCTGCAAACAGCAACACGATTTCTGTGATTCGGGATTCAGGTGCGATCACTAACCTTGTCGAGCTTTTGAGCCATGGGAGTGAGGAAGCAAAGCTAAATGTTTCTGGGGCATTTTCTCAGCTGAGCTATAGTGAAAGCGGTAGAATGGCCCTTGCTGATGCTGGTGCA 210 0.4762 GEAKTTAADVIWDLSANSNTISVIRDSGAITNLVELLSHGSEEAKLNVSGAFSQLSYSESGRMALADAGA 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1225362g00001 70 SUPERFAMILY ARM repeat 5 69 IPR016024 -
Trme1225362g00001 70 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 28 70 IPR000225 GO:0005515
Trme1225362g00001 70 Gene3D - 1 70 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1225362g00001 7 70 U-box Gene Family AT2G23140 35.938 5.75e-06 40.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1225362g00001 - - tpra:123912979 117.087