Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12238g00001 ATGTCCATGGTGATTCTAGCTGTTGGAACAAAGCTTCAAGCAATTATAACTAGAATGGCACTTGATATAAAAGAAAGACATGCAGTAGTGCAAGGGATCCCTCTTGTACAAGTCTCGGACAAATATTTTTGGTTTGAATGGCCTCAATTAGTTCTTTATCTCCTACATTATGTCCTCTTTCAGAATGCATTTGAGCTGACATTTTTCTGGTGGACTTGGTATGAATTTGGGTGGGCGTCGTGCTTTTACGAGGATGATAGTCTTATGATTGTGAGAGTTGCTCTTGGGTTGGGTGCTCAATTTGTTTGCAGCTATATCACACTTCCTCTCTATGCATTAGTCACTCAGATGGGATCAACAATGAAGAGATCAATATTTGATGAACAAACATCAAAAGCATTGAAAAACTGGCGTAAACAAGCAATGCATAAGAAACCATCAAAGAAACATGCAACGGTGGAAACTCGAACATTAGGAAGTGGTGGTAGCCCAATGGATTCACCTATGCATACACAGTTAGAGGATGTAAACATCGAAAGCGCTGAAACAGAATTGCAGGAGCAAGGCACCGCCACCATAGTAACCAGTGTCGATCGAAATGACAACTTTGATAATCGTGACCTTCTAACCGGACCTTAA 639 0.4069 MSMVILAVGTKLQAIITRMALDIKERHAVVQGIPLVQVSDKYFWFEWPQLVLYLLHYVLFQNAFELTFFWWTWYEFGWASCFYEDDSLMIVRVALGLGAQFVCSYITLPLYALVTQMGSTMKRSIFDEQTSKALKNWRKQAMHKKPSKKHATVETRTLGSGGSPMDSPMHTQLEDVNIESAETELQEQGTATIVTSVDRNDNFDNRDLLTGP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12238g00001 212 MobiDBLite consensus disorder prediction 153 167 - -
Trme12238g00001 212 PANTHER MLO-LIKE PROTEIN 1 3 180 IPR004326 GO:0006952|GO:0016020
Trme12238g00001 212 MobiDBLite consensus disorder prediction 190 212 - -
Trme12238g00001 212 MobiDBLite consensus disorder prediction 144 170 - -
Trme12238g00001 212 Pfam Mlo family 3 166 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12238g00001 Trme-Chr12238 316 1573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12238g00001 3 212 MLO family AT2G33670 55.140 9.68e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12238g00001 K08472 - gmx:100809512 310.457