Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12237g00001 ATGGAGACTGAGAAAAATGTTTTTGTCGTCTTTTATGCTGGTGAAAAAGTGAAAGGCAAGATTCTGAAAATCTGTGATGCCTTTGGTGCTAATCGATACCCGTTTGCTGAGGAACTTGGAAAACAAGCTCAAATGATTTCCGAGGTTTCTGGAAGACTTGCAGAATTGAAGACCACCATAGATGCTGGACTTTTGCACCGAGTTAACTTGCTGCAAAATATTGGGACTCAGTACGAGCAATGGAATCTTTTG 252 0.4087 METEKNVFVVFYAGEKVKGKILKICDAFGANRYPFAEELGKQAQMISEVSGRLAELKTTIDAGLLHRVNLLQNIGTQYEQWNLL 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12237g00001 84 PANTHER VACUOLAR PROTON ATPASES 2 82 IPR002490 GO:0033179|GO:0046961|GO:1902600
Trme12237g00001 84 Pfam V-type ATPase 116kDa subunit family 2 83 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12237g00001 Trme-Chr12237 137 1476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12237g00001 2 83 Primary Pumps ATPases(2) AT4G39080 74.390 5.92e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12237g00001 K02154 - gmx:100810062 143.665