Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122370g00001 CCTGAGAATGATTTTTTTGAGCTGGTTTGGGAGAGTGGTCAGATTTCAAGCCAAGGTCAATCAAGTAGAGGTAGAAAGAGTCCATCTTGTAGGAGTTTACCATCTCACTGCTTACCATCTCATAGTCCTAGAGGTCGAGATAAAGACGTAGGAGGAGGAGGATATGGTAATAACAATCCGAAGACGGGAAAATTTTGTGATTTGGACTCTGGATTGAATGAGATTCCAATGTCGGTGCCATCTCGTGAAGTAGATGAAATGATGCCTTGGTTGGATTATACAATGGATGGTTCTTTTCAAACCGAATATGGTTCTGATTTCTTACATGAACTTACGGAGAATGACCTTCCTGCCTCGAATAATTTTACTCTATTGGAGAAAAGGAGTAACGGTAATCAGATGTTTAGGGACTCTCATAAAAATTCTGCAGAACCGATGAATGTTTCTAAGGATTCTTCAGCTGAACAGGTTGAGACTGCAAGACATAAAGGTAGCACAAGTCAGTTATATCCGCCATCATCGAATCAGTGTCAAACATCATTTGAAACTGTTAGATCC 558 0.4032 PENDFFELVWESGQISSQGQSSRGRKSPSCRSLPSHCLPSHSPRGRDKDVGGGGYGNNNPKTGKFCDLDSGLNEIPMSVPSREVDEMMPWLDYTMDGSFQTEYGSDFLHELTENDLPASNNFTLLEKRSNGNQMFRDSHKNSAEPMNVSKDSSAEQVETARHKGSTSQLYPPSSNQCQTSFETVRS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122370g00001 186 MobiDBLite consensus disorder prediction 11 36 - -
Trme122370g00001 186 MobiDBLite consensus disorder prediction 129 186 - -
Trme122370g00001 186 PANTHER TRANSCRIPTION FACTOR PIF3 1 183 IPR044273 GO:0003700|GO:0006355
Trme122370g00001 186 MobiDBLite consensus disorder prediction 11 69 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122370g00001 1 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 32.886 8.16e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122370g00001 K12126 - gmx:100794974 228.794