Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12235g00001 ATGCATAAGAGACATATCTTGCCGAAGCAAGAAGATCGGAAATGGCTAAATCAAAGAGATCCAACGCAAAGGAGCTATTGTATTCAAAGGCCAATTATGCCTGGTCCTCCATCATATTATTCTAACCATACCCTTCCTCCACCTCCTTTATATCCTATGTGGGGACAATCTGGAACTCAAACTGCTGGAATGCAGGTTTGGGGCCCTTCTGGTTATCCCTTGTGGCAGCCTGCAGAAACTTGGCACTGGCAACCATTTCCGGTGATGCATGCAGATACATGGGGCACCCCRGTGTTACCACCACCTCAACCTCCTTGCTATTCCTATTCTCAGAATACACCTGCAGTGAGTAACGCTAATGGAGTGGATTACATGTTTGGCATGCCCCACAGTTCCTTTGACGATTATCCGGCGGAGGAGGTTATTGACAATGTTGTGACGGAGGCAATAAGTAAGCCATGGCTACCTTTGCCGATAGGCCTCAAACCTCCTTCCACGGATAGTGTATTGGCTGAGCTTTCCAGGCAAGGCATTTCCAACATCCCTCCAAGCAACAATGGTTATATTCCCAATTGA 576 0.4722 MHKRHILPKQEDRKWLNQRDPTQRSYCIQRPIMPGPPSYYSNHTLPPPPLYPMWGQSGTQTAGMQVWGPSGYPLWQPAETWHWQPFPVMHADTWGTPVLPPPQPPCYSYSQNTPAVSNANGVDYMFGMPHSSFDDYPAEEVIDNVVTEAISKPWLPLPIGLKPPSTDSVLAELSRQGISNIPPSNNGYIPN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12235g00001 191 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 184 IPR044825 GO:0003700|GO:0045893
Trme12235g00001 191 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12235g00001 Trme-Chr12235 39 1598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12235g00001 2 185 Response Regulator Gene Family AT4G18020 40.201 9.32e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12235g00001 - - vvo:131638406 311.612