Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122305g00001 CCTGGACAACGCAGTAGATTGTGGGACCCTGAGGAAATCTATGATGTATTGACAAATAATACGGGAACTAGTGCTGTTGAAGGCATATTGTTAGATATGGATCAAATCGCATCTATAAATCTGAGCTCCAAAGCATTCAAAGAAATGCCAAACCTAAGGTTACTTGCTTTTCGAGACCTTAAGGGAATTAGTACTGTCTATCTTCCAATGGGTCTTGACTTATTACCTAAAAATTTAAGATATTTAGAATGGAATGGGTTTCCATTGAAGTCCCTACCATCAACATTTTGTCCTGAGATGCTTGTGGAGCTTTCCTTACCACACAGCAATGTGGAAAAACTTTGGAATGGAGTACTGGTATGCATCATCCATTTATCTATTACAGACTTACAGTACAATATATTTCAATTTTCTTTTGATAGAAGTTGA 429 0.3683 PGQRSRLWDPEEIYDVLTNNTGTSAVEGILLDMDQIASINLSSKAFKEMPNLRLLAFRDLKGISTVYLPMGLDLLPKNLRYLEWNGFPLKSLPSTFCPEMLVELSLPHSNVEKLWNGVLVCIIHLSITDLQYNIFQFSFDRS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122305g00001 142 Pfam Leucine Rich Repeat 101 118 IPR011713 -
Trme122305g00001 142 SUPERFAMILY L domain-like 30 130 - -
Trme122305g00001 142 Gene3D Ribonuclease Inhibitor 15 142 IPR032675 -
Trme122305g00001 142 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 132 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122305g00001 Trme-Chr122305 3 571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122305g00001 1 138 WRKY Transcription Factor Family AT4G12020 43.662 7.56e-28 105