Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122178g00001 ATGGTAAATGATACTTGTCAGGGAATTTCCTTTGTCATCAACAACATAGCTAGTTATGGAGGTGACCCTAATAGGATTTACCTAATGGGACAATCTGCTGGTGCGCATATTTCGTCTTGTGCTTTATTGGAACAAGCAACCATGGAATCTGGAAATGGAGATGGTGTTTCTTGGAGCGTTTCCCAGATAAAAGCTTATTTTGGGTTATCAGGAGG 215 0.4093 MVNDTCQGISFVINNIASYGGDPNRIYLMGQSAGAHISSCALLEQATMESGNGDGVSWSVSQIKAYFGLSGG 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122178g00001 72 Pfam BD-FAE 2 50 - -
Trme122178g00001 72 SUPERFAMILY alpha/beta-Hydrolases 2 51 IPR029058 -
Trme122178g00001 72 Gene3D alpha/beta hydrolase 1 72 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122178g00001 Trme-Chr122178 131 439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122178g00001 1 72 Carbohydrate Esterase AT3G02410 79.167 5.46e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122178g00001 K15889 - vum:124843777 133.65