Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122145g00001 ATGTTGTTAATTTACAATTACCTCTCTGGTGGAAACCTTGAAGCTTTCATACGGTCAGGAAAAAATGTAAAGTGGCCGGTTATTTACAAAATTGCGAAAGACATTGCCAAGGCCCTTGCTTACCTTCATTATGCTTGTGTTCCTCGAATAATTCACCGAGATATCAAGCCTAGCAACATTTTACTCGACGGAAATCTAAATGCCTACCTGTCCGATTTCGGCTTGGCACGGCTGCTTGAGGTATCCGAGACTCATGCCACTACCGATGTGGCCGGCACGTTTGGTTATGTTGCACCTGAATATGCCATCACTTGTAGGGTTTCTGATAAAGCCGATGTTTATAGCTACGGTGTGGTGCTATTAGAATTGATATCAGGAAAAAG 383 0.4308 MLLIYNYLSGGNLEAFIRSGKNVKWPVIYKIAKDIAKALAYLHYACVPRIIHRDIKPSNILLDGNLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYAITCRVSDKADVYSYGVVLLELISGK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122145g00001 127 FunFam Os07g0541700 protein 11 93 - -
Trme122145g00001 127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Trme122145g00001 127 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 127 - -
Trme122145g00001 127 Pfam Protein kinase domain 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme122145g00001 127 SUPERFAMILY Protein kinase-like (PK-like) 2 127 IPR011009 -
Trme122145g00001 127 SMART serkin_6 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme122145g00001 127 Gene3D Transferase(Phosphotransferase) domain 1 1 127 - -
Trme122145g00001 127 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122145g00001 Trme-Chr122145 52 434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122145g00001 1 127 Receptor kinase-like Gene Family AT3G02130 76.378 5.73e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Trme122145g00001 Pkinase 5.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122145g00001 - - cam:101512699 239.965