Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme122082g00001 | ATGCCTTGTAGCAGCATTCAACGACTATGGTATGGTGACCAGGATCTCCCTTGTTTGAAAAGGGTGGATCTTAGCAACTCCAAATATTTTGTGGAGACTCCAAATTTTGCTGGATGCCGAAGACTTGAGCGGCTAGATCTTACTGGGTGCAGAAACCTATCGTATGTCCATCCATCCATTGGGCGTCTGGTAAAACTTGCTTTCTTGAGTTTGGAAGGCTGCAGCAGTTTGGTCAGGCTAGTTCTTGATGGTGA | 254 | 0.4606 | MPCSSIQRLWYGDQDLPCLKRVDLSNSKYFVETPNFAGCRRLERLDLTGCRNLSYVHPSIGRLVKLAFLSLEGCSSLVRLVLDG | 84 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme122082g00001 | 84 | Gene3D | Ribonuclease Inhibitor | 1 | 83 | IPR032675 | - | |
| Trme122082g00001 | 84 | SUPERFAMILY | RNI-like | 8 | 77 | - | - | |
| Trme122082g00001 | 84 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 1 | 78 | IPR044974 | GO:0006952 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme122082g00001 | Trme-Chr122082 | 1 | 561 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme122082g00001 | 1 | 77 | WRKY Transcription Factor Family | AT5G45050 | 35.065 | 1.63e-10 | 53.5 |