Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122082g00001 ATGCCTTGTAGCAGCATTCAACGACTATGGTATGGTGACCAGGATCTCCCTTGTTTGAAAAGGGTGGATCTTAGCAACTCCAAATATTTTGTGGAGACTCCAAATTTTGCTGGATGCCGAAGACTTGAGCGGCTAGATCTTACTGGGTGCAGAAACCTATCGTATGTCCATCCATCCATTGGGCGTCTGGTAAAACTTGCTTTCTTGAGTTTGGAAGGCTGCAGCAGTTTGGTCAGGCTAGTTCTTGATGGTGA 254 0.4606 MPCSSIQRLWYGDQDLPCLKRVDLSNSKYFVETPNFAGCRRLERLDLTGCRNLSYVHPSIGRLVKLAFLSLEGCSSLVRLVLDG 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122082g00001 84 Gene3D Ribonuclease Inhibitor 1 83 IPR032675 -
Trme122082g00001 84 SUPERFAMILY RNI-like 8 77 - -
Trme122082g00001 84 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 78 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122082g00001 Trme-Chr122082 1 561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122082g00001 1 77 WRKY Transcription Factor Family AT5G45050 35.065 1.63e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122082g00001 - - vvo:131643801 140.969