Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme122072g00001 ATTGCTCTCTCTGAGGATCATAAACCTAATAGAAGTGACGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTTCAGAATCTGATGGGATTCCCGTCAATTCATCATTCGCCAAAGTTGAGGTTTAA 141 0.4468 IALSEDHKPNRSDERKRIENAGGVVMWAGSESDGIPVNSSFAKVEV 46
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme122072g00001 46 Gene3D - 1 42 IPR036457 -
Trme122072g00001 46 Pfam Protein phosphatase 2C 2 27 IPR001932 -
Trme122072g00001 46 SUPERFAMILY PP2C-like 2 27 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme122072g00001 Trme-Chr122072 298 538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme122072g00001 1 30 PP2C-type Phosphatase Gene Family AT5G53140 86.667 5.41e-14 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme122072g00001 K17506 - msin:131241243 63.929