Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12202g00001 GGTCCCATGGAAAATCAGTTGAAACAGCGCAAAGCGATCATGCCTAGAAAGCGAGCTCCTCGCTCAACTACAACTGCTAGGCCTGAACAGCTGGATGATGCTGTTGGAGGGGCACAAACAGATACCGACAAAAACATGTCGATCATGTTTAACATATTAAGGGAAAAGAAAAGGGTCCAACTTGAACACCTGATTTTGAACAGANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNAGGTTGCACTATGTTGCACCGAAGAATGCTCCGGCTGCCAACTCTGTAATGTCAAAAGAAGTTTCTTACACTCATTTTGTCTTCAGATATGATTTCAATGACTGGAAGATAATGAAGGATGTTGTGGCTGAGGGTGAAGAGTTAATGCCACATAGGATTCAATACAGCGACGTGGTTGACTCACCGGCAGAAACAAGCGGTGACAATTCACAACAAGCTGCGGCCGTAACTCCGATTAGAAAGATATCCAGAAATCGGGGGCGGGTTCTGCAGGAAGAAGTTGTTGTGGAAGAATCACCCGAGTGCAATGATGAAAACTCTTCTAGAGCTGCTGCAATACGAAGGTGTAAGCGTAAACTTCCTTAA 657 0.3896 GPMENQLKQRKAIMPRKRAPRSTTTARPEQLDDAVGGAQTDTDKNMSIMFNILREKKRVQLEHLILNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLHYVAPKNAPAANSVMSKEVSYTHFVFRYDFNDWKIMKDVVAEGEELMPHRIQYSDVVDSPAETSGDNSQQAAAVTPIRKISRNRGRVLQEEVVVEESPECNDENSSRAAAIRRCKRKLP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12202g00001 218 Coils Coil 66 68 - -
Trme12202g00001 218 PANTHER UNCHARACTERIZED 98 202 IPR027786 GO:0005634|GO:0006281|GO:0030915
Trme12202g00001 218 Coils Coil 98 98 - -
Trme12202g00001 218 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12202g00001 Trme-Chr12202 2 1328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12202g00001 1 217 Non-SMC Element family AT1G51130 44.749 4.00e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12202g00001 K22825 - gmx:100817716 251.906