Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12198g00001 ATTGAGCAGTGGAAATTGGGATGGAACATGAGACTGCTAGCAGTTGTTTACTGTGGGACACTAGTGACTGCAGTTGCATACTACCTTCAAGCACTAGTGATTGATAAGAAAGGACCAGTTTTCCCAGCAACCTGGAATCCACTGAGCTTTATAATTGCTACCATTGGTTCTGTTTTGCTCTTGGGAGAGCCACTATGTTTAGGAAGTCTCCGAGGGAATTTGAACTTCGTACTAGATTACAATGCTAAGCACTTAGGATTGAAGCTAGCACCTCACGTGCGAACTTAA 288 0.434 IEQWKLGWNMRLLAVVYCGTLVTAVAYYLQALVIDKKGPVFPATWNPLSFIIATIGSVLLLGEPLCLGSLRGNLNFVLDYNAKHLGLKLAPHVRT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12198g00001 95 SUPERFAMILY Multidrug resistance efflux transporter EmrE 8 68 - -
Trme12198g00001 95 PANTHER WAT1-RELATED PROTEIN 3 69 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12198g00001 Trme-Chr12198 2 823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12198g00001 4 78 Nodulin-like Gene Family AT5G07050 36.000 6.25e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12198g00001 - - lja:Lj1g3v1255840.3 115.931