Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12185g00001 GCTACCCAAGCTTTTAAGATGATGGATATTGGGCCACTGGATATCGGCGATTACCTAGCTATTGGAGCGATATTTGCTGCGACAGATTCTGTTTGCACGTTACAGGTGCTAAATCAGGATGAGACACCTTTGTTATATAGTCTTGTATTTGGGGAAGGGGTTGTGAATGATGCTACCTCGGTGGTGCTTTTCAATGCAATTCAAAACTTTGATCTCGACCGATTTAATCCTTCAATTGCAGTGCACTTTTTGGGCAACTTCTTATATTTGTTTATAGCAAGCACACTCCTTGGTGTTTTGACAGGTCTGCTTAGTGCTTACGTTATCAAAAAGCTGTACATTGGCAGGCACTCAACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCATACCTCTCCTATATGCTGGCTGAGTTATTCTATCTGAGTGGCATTCTCACAGTATTCTTTTGTGGTATTGTTATGTCTCATTATACTTGGCATAATGTGACCGAGAGTTCAAGAGTCACTACCAAGTATGTCTTCTAA 528 0.4129 ATQAFKMMDIGPLDIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDLDRFNPSIAVHFLGNFLYLFIASTLLGVLTGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKYVF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12185g00001 175 PANTHER SODIUM/HYDROGEN EXCHANGER 12 175 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trme12185g00001 175 Gene3D - 15 66 - -
Trme12185g00001 175 Pfam Sodium/hydrogen exchanger family 10 166 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12185g00001 Trme-Chr12185 273 1470 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12185g00001 1 175 Antiporters AT3G05030 84.000 1.97e-100 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12185g00001 - - gmx:732573 301.597