Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme121827g00001 ATGGATGGATGGCCAGCATTATCCATCCATGGTGATAAAAACCAGGCTGAAAGGGACTGGGTTTTGGCTGAATTTAAGAGTGGCAGAAGTCCAATAATGACTGCCACTGATGTTGCTGCACGGGGTCTTG 130 0.4769 MDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 43
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme121827g00001 43 Gene3D - 1 43 IPR027417 -
Trme121827g00001 43 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 43 - -
Trme121827g00001 43 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 43 IPR027417 -
Trme121827g00001 43 Pfam Helicase conserved C-terminal domain 4 43 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme121827g00001 Trme-Chr121827 281 410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme121827g00001 8 43 Eukaryotic Initiation Factors Gene Family AT3G19760 52.778 3.47e-08 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme121827g00001 K12823 - zju:107418309 92.4337