Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme121749g00001 AATTGGTATTGCTATGGGAAAGCAGTGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAGAAAGGGGTTGATTTGGTTGTAGTGAATCCAGTTTTAGTTCTTGGACCATTGCTACAACCCACAATCAATGCAAGCACAATTCACATACTAAAGTACCTAACTGGATCAGCTAAGACCTATGCAAATGCAACACAAGCTTATGTTCATGTTAGGGATGTGGCATTAGCTCACATACTTGTTTTTGAGAAACCATCTGCTTCTGGTAGATACTTATGTGCTGAAAGTTCATTGCACCGTGGGGAGCTTGTTGAAATTCTTGCCAAGTACTTCCCAGAGTACCCCATTCCTACCAAGTAA 357 0.4202 NWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVFEKPSASGRYLCAESSLHRGELVEILAKYFPEYPIPTK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme121749g00001 118 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 116 - -
Trme121749g00001 118 Pfam NAD dependent epimerase/dehydratase family 3 86 IPR001509 -
Trme121749g00001 118 Gene3D - 1 118 - -
Trme121749g00001 118 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 117 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme121749g00001 Trme-Chr121749 58 414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme121749g00001 1 118 Monolignol Biosynthesis Gene Families AT1G15950 84.746 2.62e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme121749g00001 K09753 - gmx:100789070 222.246