Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1217052g00001 CTCCCATCTTCAATTGGGTCTTCTAGAAAAGGTTCCTTTGTTATTAAGGCAGCTGCTGCTACTCCTCCTGTCAAGCAAGGTGGAGCAGATAAGCCTTTGTGGTTTGCATCAAAGCAAAGTCTCTTTTACTTGGATGGCAGCCTTCTAGGTGACTATGGATTTGATCCTCTAGGACTTTCAGATCCAGAAGGAACAGGAG 199 0.4523 LPSSIGSSRKGSFVIKAAAATPPVKQGGADKPLWFASKQSLFYLDGSLLGDYGFDPLGLSDPEGTG 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1217052g00001 66 Gene3D Chlorophyll a/b binding protein domain 32 65 - -
Trme1217052g00001 66 SUPERFAMILY Chlorophyll a-b binding protein 30 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1217052g00001 Trme-Chr1217052 11 209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1217052g00001 2 66 Chloroplast and Mitochondria Gene Families AT1G61520 76.923 1.26e-25 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1217052g00001 K08909 - pvy:116132883 107.071