Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme121540g00001 ATGGTCGGAGAGTATGGAGCTCAGCTTTCTGGAGGCCAAAAGCAACGAATTGCTATAGCAAGAGCAATTCTGAAAGATCCAAGAATTTTACTACTCGATGAAGCAACAAGTGCTCTTGACGTGGAATCAGAAAGAGTGGTACAAGAGACACTAGACAGAATCATGATAAATCGAACAACCATCATTGTAGCTCACCGCCTAAGCACGATAAGAAATGCTGATATCATTGCTGTTATTCATCAAGGAAAAGTAGTAGAAAAAG 262 0.4046 MVGEYGAQLSGGQKQRIAIARAILKDPRILLLDEATSALDVESERVVQETLDRIMINRTTIIVAHRLSTIRNADIIAVIHQGKVVEK 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme121540g00001 87 PANTHER ABC TRANSPORTER B FAMILY 1 87 IPR039421 -
Trme121540g00001 87 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 86 IPR027417 -
Trme121540g00001 87 Pfam ABC transporter 3 37 IPR003439 GO:0005524
Trme121540g00001 87 Gene3D - 1 87 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme121540g00001 Trme-Chr121540 41 302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme121540g00001 2 87 Calmodulin-binding Proteins AT2G36910 70.930 7.52e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme121540g00001 K05658 - lja:Lj0g3v0323809.1 155.606