Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme121518g00001 ATGAAGAACTACACAATCTATGCTGTTTCTATCACCATCCGTATTGTGTTTGGATTCATGCTCGTTGCTTTGATATGGAAGTTTGACTTCTCACCTTTCATGGTCCTCATTATCGCCATCTTGAACGATGGAACCATCATGACCATCTCTAAGGATAGAGTGAAGCCATCACCAGTTCCTGATTCATGGAAGCTCAAAGAAATCTTTGCCACTGGAATTATTCTTGGATCTTACATGGCCATCATCACTGTTGTGTTCTTCTATTTAGTTCATGATACTGATTTCTTCACCAAAGTTTTTGGTGTGAATCCAATTTCAGACAGTAATGATCAACTTAACTCAGCTTTGTATCTTCAA 357 0.3838 MKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFATGIILGSYMAIITVVFFYLVHDTDFFTKVFGVNPISDSNDQLNSALYLQ 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme121518g00001 119 PANTHER CALCIUM-TRANSPORTING ATPASE 1 119 - -
Trme121518g00001 119 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 104 IPR023298 -
Trme121518g00001 119 Gene3D - 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme121518g00001 Trme-Chr121518 60 517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme121518g00001 1 119 Primary Pumps ATPases AT3G42640 79.832 2.88e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme121518g00001 K01535 - gmx:100798717 223.016