Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme121476g00001 | AAGCCTAAGCACCCTACATATGTCCCAATTGAGCTCTGCTCATTGGTATCCCTTCAACGGTATTCCAAAGCCCTTTCCACTCTTCAAAGGTCATCCCTTGTAGAAAAGTCAAGGCTGAAGCCTCAAGAACGGATGAAGGTCTTGTCAGATGCTTTGAGAACTAGCTACTATGGCTCTGAGCCCATGCTACGTAACTGTGGCATTTCAATCACATCTGGGTTCACACAAGTTGATGGGAGGGTTTTGCAGGCTCCAAGGTTGAAGTTTGGCAACGRAGAAGATTTCAATCCCWGAAATGGGAGATGGAAWTTTAATAACAAGAAAATCGTGCAACCTGTTAAAATAGAGAAATGGGCTGTGGTGAAYTTTTCTGCTCGTTGTGATGTGCGAGGACTTGTAAGAGATCTGATCAAATGTGGAGGAATGAAAGGAATCCTTGTGGAACAACCATTTGATGTATTTGAAGAACATGGTCAGTTTAGGCATGCACCACCTTTGGTAAGAGTTGAGCAAATGTTTGATCATGTTCAGTCCAAACTTCCAGGTGCTCCTAAGTTTCTCTGTAAGAAATTAGGGCTGAATGAATAA | 588 | 0.4252 | KPKHPTYVPIELCSLVSLQRYSKALSTLQRSSLVEKSRLKPQERMKVLSDALRTSYYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNXEDFNPXNGRWXFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGILVEQPFDVFEEHGQFRHAPPLVRVEQMFDHVQSKLPGAPKFLCKKLGLNE | 195 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme121476g00001 | 195 | Gene3D | - | 81 | 190 | - | - | |
Trme121476g00001 | 195 | SUPERFAMILY | PAZ domain | 1 | 55 | IPR036085 | GO:0005515 | |
Trme121476g00001 | 195 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 2 | 181 | - | - | |
Trme121476g00001 | 195 | Pfam | Argonaute linker 2 domain | 43 | 89 | IPR032472 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme121476g00001 | Trme-Chr121476 | 1 | 588 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme121476g00001 | 3 | 124 | Eukaryotic Initiation Factors Gene Family | AT5G43810 | 32.000 | 7.15e-19 | 82.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme121476g00001 | K11593 | - | gmx:100779439 | 329.331 |