Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme121476g00001 AAGCCTAAGCACCCTACATATGTCCCAATTGAGCTCTGCTCATTGGTATCCCTTCAACGGTATTCCAAAGCCCTTTCCACTCTTCAAAGGTCATCCCTTGTAGAAAAGTCAAGGCTGAAGCCTCAAGAACGGATGAAGGTCTTGTCAGATGCTTTGAGAACTAGCTACTATGGCTCTGAGCCCATGCTACGTAACTGTGGCATTTCAATCACATCTGGGTTCACACAAGTTGATGGGAGGGTTTTGCAGGCTCCAAGGTTGAAGTTTGGCAACGRAGAAGATTTCAATCCCWGAAATGGGAGATGGAAWTTTAATAACAAGAAAATCGTGCAACCTGTTAAAATAGAGAAATGGGCTGTGGTGAAYTTTTCTGCTCGTTGTGATGTGCGAGGACTTGTAAGAGATCTGATCAAATGTGGAGGAATGAAAGGAATCCTTGTGGAACAACCATTTGATGTATTTGAAGAACATGGTCAGTTTAGGCATGCACCACCTTTGGTAAGAGTTGAGCAAATGTTTGATCATGTTCAGTCCAAACTTCCAGGTGCTCCTAAGTTTCTCTGTAAGAAATTAGGGCTGAATGAATAA 588 0.4252 KPKHPTYVPIELCSLVSLQRYSKALSTLQRSSLVEKSRLKPQERMKVLSDALRTSYYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNXEDFNPXNGRWXFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGILVEQPFDVFEEHGQFRHAPPLVRVEQMFDHVQSKLPGAPKFLCKKLGLNE 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme121476g00001 195 Gene3D - 81 190 - -
Trme121476g00001 195 SUPERFAMILY PAZ domain 1 55 IPR036085 GO:0005515
Trme121476g00001 195 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 181 - -
Trme121476g00001 195 Pfam Argonaute linker 2 domain 43 89 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme121476g00001 Trme-Chr121476 1 588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme121476g00001 3 124 Eukaryotic Initiation Factors Gene Family AT5G43810 32.000 7.15e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme121476g00001 K11593 - gmx:100779439 329.331