Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1214238g00001 GAATTGAAATCCGACAACTTGTTGATTTTTGGTGACAAGGTAATCAAAATTGATGACTTTGGAGTCGCTCGGATTGAGGCGAAAACTAAAGGAATGACTCCCGAGACTGGAACATACCGTTGGATGGCTCCGTAA 135 0.4296 ELKSDNLLIFGDKVIKIDDFGVARIEAKTKGMTPETGTYRWMAP 44
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1214238g00001 44 Gene3D Transferase(Phosphotransferase) domain 1 1 44 - -
Trme1214238g00001 44 Pfam Protein kinase domain 2 44 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme1214238g00001 44 SUPERFAMILY Protein kinase-like (PK-like) 2 44 IPR011009 -
Trme1214238g00001 44 ProSiteProfiles Protein kinase domain profile. 1 44 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1214238g00001 Trme-Chr1214238 62 196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1214238g00001 1 44 MAP Kinase Kinase Kinase AT2G24360 81.818 1.07e-20 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme1214238g00001 Pkinase 2.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1214238g00001 - - aof:109842814 83.5741