Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme121384g00001 ATGAGCACTGTTTCAAAGGACAATGATGATTATGAGTCAGATACAGAGGACTCTGGAAGTGTTGATGATGAGCTTAACAACTCTGATACATGTAGCAGTGGAGATGATTTTGAAAGCGGTTCAATAAACTCTAATATAAGAAAATTGAAGCGTGATAACAATCGTAAAGTTAAACATAATAGGCTGAAAGTTTACACTGAAATTGATGAGAGCCGTGCAGGAGAAGTGTGGTTGTTAGGACTGATGGATAGTGAATACTCAGATTTGAAAATTGAAGAAAAATTGAATGCGTTGGCAGCGTTGACCGGTCTTCTTTCATCCGGATCCAGCATCAGGATGAAGGTAAGCCACTTAC 355 0.3887 MSTVSKDNDDYESDTEDSGSVDDELNNSDTCSSGDDFESGSINSNIRKLKRDNNRKVKHNRLKVYTEIDESRAGEVWLLGLMDSEYSDLKIEEKLNALAALTGLLSSGSSIRMKVSHL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme121384g00001 118 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 73 112 IPR028942 -
Trme121384g00001 118 MobiDBLite consensus disorder prediction 24 43 - -
Trme121384g00001 118 MobiDBLite consensus disorder prediction 1 43 - -
Trme121384g00001 118 PANTHER HOMEOBOX PROTEIN SIX 9 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme121384g00001 Trme-Chr121384 268 622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme121384g00001 68 115 Homeobox Transcription Factor Family AT5G44180 47.917 5.65e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme121384g00001 - - mtr:112417546 188.734