Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12124g00001 ATGTGTCCTCTAAGAGTCAATGATCAGTATCTGGGCAATATTATGTTGAAGATCAATGCCAAGCTTGGTGGGCTGAACTCATTGTTGGGTGTTGAAAGTACTCCTTCTCTTCCTATTGTTTCCAAAGCACCCACTCTCATTCTAGGAATGGATGTGTCACATGGCTCACCAGGGCAGACTGATATTCCTTCAATTGCGGCTGTTGTTAGCTCTAGACAGTGGCCTCTGATTTCAAAATATAGAGCTTGTGTCCGCACACAGTCTGCAAAAGTTGAAATGATAGATAATTTGTTCAAGAAAGTATCAGATACCGAGGATGAAGGCATCATGAGGGAACTCTTACTCGATTTYTATAATAGTTCTGGCAAGAGAAAACCAGATAACATAATCATTTTCAG 398 0.407 MCPLRVNDQYLGNIMLKINAKLGGLNSLLGVESTPSLPIVSKAPTLILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSAKVEMIDNLFKKVSDTEDEGIMRELLLDFYNSSGKRKPDNIIIF 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12124g00001 132 Pfam Piwi domain 7 132 IPR003165 GO:0003676
Trme12124g00001 132 Gene3D - 37 132 IPR036397 GO:0003676
Trme12124g00001 132 SUPERFAMILY Ribonuclease H-like 9 132 IPR012337 -
Trme12124g00001 132 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 7 132 - -
Trme12124g00001 132 Gene3D - 3 31 - -
Trme12124g00001 132 ProSiteProfiles Piwi domain profile. 1 132 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12124g00001 Trme-Chr12124 612 1560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12124g00001 4 132 Eukaryotic Initiation Factors Gene Family AT1G48410 42.105 4.36e-29 108