Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1212305g00001 ATGCGGGAGATTGCAGAGGCATATTTGGAATCACCGGTTAAAAATGCAGTCATTACCGTGCCAGCTTATTTCAATGATTTTCAACGGAAAGCCACCATAGATGCCGGTGCTATTGCTGGCCTTGATGTTATGAGGATAATGTGCGAGCCTACTGCAGCAGCTGTTGCATATAGTCTTGACAAGAGAAC 188 0.4521 MREIAEAYLESPVKNAVITVPAYFNDFQRKATIDAGAIAGLDVMRIMCEPTAAAVAYSLDKRT 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1212305g00001 63 Pfam Hsp70 protein 1 62 IPR013126 GO:0005524|GO:0140662
Trme1212305g00001 63 SUPERFAMILY Actin-like ATPase domain 1 61 IPR043129 -
Trme1212305g00001 63 FunFam Endoplasmic reticulum chaperone BiP 1 63 - -
Trme1212305g00001 63 Gene3D - 1 63 - -
Trme1212305g00001 63 PANTHER HEAT SHOCK PROTEIN 70KDA 1 60 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1212305g00001 Trme-Chr1212305 1 188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1212305g00001 1 62 Calmodulin-binding Proteins AT3G12580 77.419 2.73e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1212305g00001 K03283 - gmx:102667572 109.768